MapReduce将HDFS文本数据导入HBase中

发表于 2015-08-13

HBase本身提供了很多种数据导入的方式，通常有两种常用方式：

使用HBase提供的TableOutputFormat，原理是通过一个Mapreduce作业将数据导入HBase
另一种方式就是使用HBase原生Client API

本文就是示范如何通过MapReduce作业从一个文件读取数据并写入到HBase中。

首先启动Hadoop与HBase，然后创建一个空表，用于后面导入数据：

hbase(main):006:0> create 'mytable','cf'
0 row(s) in 10.8310 seconds

=> Hbase::Table - mytable
hbase(main):007:0> list
TABLE                                                                                                   
mytable                                                                                                 
1 row(s) in 0.1220 seconds

=> ["mytable"]
hbase(main):008:0> scan 'mytable'
ROW                         COLUMN+CELL                                                                 
0 row(s) in 0.2130 seconds

一、示例程序

下面的示例程序通过TableOutputFormat将HDFS上具有一定格式的文本数据导入到HBase中。

首先创建MapReduce作业，目录结构如下：

Hdfs2HBase/
├── classes
└── src
    ├── Hdfs2HBase.java
    ├── Hdfs2HBaseMapper.java
    └── Hdfs2HBaseReducer.java

Hdfs2HBaseMapper.java

package com.lisong.hdfs2hbase;

import java.io.IOException;

import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Mapper;

public class Hdfs2HBaseMapper extends Mapper<LongWritable, Text, Text, Text> {
        public void map(LongWritable key, Text line, Context context) throws IOException,InterruptedException {
                String lineStr = line.toString();
                int index = lineStr.indexOf(":");
                String rowkey = lineStr.substring(0, index);
                String left = lineStr.substring(index+1);
                context.write(new Text(rowkey), new Text(left));
        }
}

Hdfs2HBaseReducer.java

package com.lisong.hdfs2hbase;

import java.io.IOException;

import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Reducer;
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
import org.apache.hadoop.hbase.client.Put;
import org.apache.hadoop.hbase.util.Bytes;

public class Hdfs2HBaseReducer extends Reducer<Text, Text, ImmutableBytesWritable, Put> {
        public void reduce(Text rowkey, Iterable<Text> value, Context context) throws IOException,InterruptedException {
                String k = rowkey.toString();
                for(Text val : value) {
                        Put put = new Put(k.getBytes());
                        String[] strs = val.toString().split(":");
                        String family = strs[0];
                        String qualifier = strs[1];
                        String v = strs[2];
                        put.add(family.getBytes(), qualifier.getBytes(), v.getBytes());
                        context.write(new ImmutableBytesWritable(k.getBytes()), put);
                }
        }
}

Hdfs2HBase.java

package com.lisong.hdfs2hbase;

import java.io.IOException;

import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
import org.apache.hadoop.hbase.client.Put;
import org.apache.hadoop.hbase.mapreduce.TableOutputFormat;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.util.GenericOptionsParser;

public class Hdfs2HBase {
	public static void main(String[] args) throws Exception {
		Configuration conf = new Configuration();
		String[] otherArgs = new GenericOptionsParser(conf, args).getRemainingArgs();
		if(otherArgs.length != 2) {
			System.err.println("Usage: wordcount <infile> <table>");
			System.exit(2);
		}

Job job = new Job(conf, "hdfs2hbase");
		job.setJarByClass(Hdfs2HBase.class);
		job.setMapperClass(Hdfs2HBaseMapper.class);
		job.setReducerClass(Hdfs2HBaseReducer.class);

job.setOutputKeyClass(ImmutableBytesWritable.class);
		job.setOutputValueClass(Put.class);

job.setOutputFormatClass(TableOutputFormat.class);

FileInputFormat.addInputPath(job, new Path(otherArgs[0]));
		job.getConfiguration().set(TableOutputFormat.OUTPUT_TABLE, otherArgs[1]);

System.exit(job.waitForCompletion(true)?0:1);
	}
}

配置javac编译依赖环境：

$HADOOP_HOME/share/hadoop/common/hadoop-common-2.4.1.jar
$HADOOP_HOME/share/hadoop/mapreduce/hadoop-mapreduce-client-core-2.4.1.jar
$HADOOP_HOME/share/hadoop/common/lib/commons-cli-1.2.jar

这里要操作HBase，故除了上面三个jar包，还需要$HBASE_HOME/lib目录下的jar包。为了方便，我们在/etc/profile的CLASSPATH里包含所有的依赖包：

TEMP=`ls /home/hadoop/hbase/lib/*.jar`
HBASE_JARS=`echo $TEMP | sed 's/ /:/g'`
export CLASSPATH=.:$JAVA_HOME/lib/dt.jar:$JAVA_HOME/lib/tools.jar:/home/hadoop/hadoop/share/hadoop/common/hadoop-common-2.6.0.jar:/home/hadoop/hadoop/share/hadoop/mapreduce/hadoop-mapreduce-client-core-2.6.0.jar:/home/hadoop/hadoop/share/hadoop/common/lib/commons-cli-1.2.jar:$HBASE_JARS

编译

$ javac -d classes/ src/*.java

打包

$ jar -cvf hdfs2hbase.jar classes

运行

创建一个data.txt文件，内容如下（列族是建表时创建的列族cf）：

r1:cf:c1:value1 
r2:cf:c2:value2 
r3:cf:c3:value3

将文件复制到hdfs上：

$ hadoop/bin/hadoop fs -put data.txt /hbase

运行MapReduce作业：

$ hadoop/bin/hadoop jar Hdfs2HBase/hdfs2hbase.jar com.lisong.hdfs2hbase.Hdfs2HBase /hbase/data.txt mytable

报错NoClassDefFoundError找不到类定义：

Exception in thread "main" java.lang.NoClassDefFoundError: org/apache/hadoop/hbase/io/ImmutableBytesWritable
	at com.lisong.hdfs2hbase.Hdfs2HBase.main(Hdfs2HBase.java:30)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	...
	at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
	at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
Caused by: java.lang.ClassNotFoundException: org.apache.hadoop.hbase.io.ImmutableBytesWritable
	at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
	... 7 more

原因是我没有把HBase的jar包加到hadoop-env.sh中。

TEMP=`ls /home/hadoop/hbase/lib/*.jar`
HBASE_JARS=`echo $TEMP | sed 's/ /:/g'`
HADOOP_CLASSPATH=$HBASE_JARS

再次运行发现又报了Unable to initialize MapOutputCollector的错误：

15/08/10 08:55:44 WARN mapred.MapTask: Unable to initialize MapOutputCollector org.apache.hadoop.mapred.MapTask$MapOutputBuffer
java.lang.NullPointerException
	at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.init(MapTask.java:1008)
	at org.apache.hadoop.mapred.MapTask.createSortingCollector(MapTask.java:401)
	...
	at java.lang.Thread.run(Thread.java:745)
15/08/10 08:55:44 INFO mapred.LocalJobRunner: map task executor complete.
15/08/10 08:55:44 WARN mapred.LocalJobRunner: job_local2138114942_0001
java.lang.Exception: java.io.IOException: Unable to initialize any output collector
	at org.apache.hadoop.mapred.LocalJobRunner$Job.runTasks(LocalJobRunner.java:462)
	at org.apache.hadoop.mapred.LocalJobRunner$Job.run(LocalJobRunner.java:522)
Caused by: java.io.IOException: Unable to initialize any output collector
	at org.apache.hadoop.mapred.MapTask.createSortingCollector(MapTask.java:412)
	...
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
	at java.lang.Thread.run(Thread.java:745)
15/08/10 08:55:44 INFO mapreduce.Job: Job job_local2138114942_0001 failed with state FAILED due to: NA
15/08/10 08:55:45 INFO mapreduce.Job: Counters: 0

原因是我没有指明Map输出的Key/Value类型，在Hdfs2HBase.java中添加以下两句：

job.setMapOutputKeyClass(Text.class);
job.setMapOutputValueClass(Text.class);

如果没有专门定义Mapper输出类型的话，job.setOutputKeyClass和job.setOutputValueClass设置的是Mapper和Reducer两个的输出类型。

job.setOutputKeyClass(ImmutableBytesWritable.class);
job.setOutputValueClass(Put.class);

而Hdfs2HBaseMapper输出类型是Text/Text，所以这里需要单独指定。

修改Hdfs2HBase.java

package com.lisong.hdfs2hbase;

import java.io.IOException;

import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
import org.apache.hadoop.hbase.client.Put;
import org.apache.hadoop.hbase.mapreduce.TableOutputFormat;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.util.GenericOptionsParser;

public class Hdfs2HBase {
	public static void main(String[] args) throws Exception {
		Configuration conf = new Configuration();
		String[] otherArgs = new GenericOptionsParser(conf, args).getRemainingArgs();
		if(otherArgs.length != 2) {
			System.err.println("Usage: wordcount <infile> <table>");
			System.exit(2);
		}

Job job = new Job(conf, "hdfs2hbase");
		job.setJarByClass(Hdfs2HBase.class);
		job.setMapperClass(Hdfs2HBaseMapper.class);
		job.setReducerClass(Hdfs2HBaseReducer.class);

job.setMapOutputKeyClass(Text.class);    // +
		job.setMapOutputValueClass(Text.class);  // +

job.setOutputKeyClass(ImmutableBytesWritable.class);
		job.setOutputValueClass(Put.class);

job.setOutputFormatClass(TableOutputFormat.class);

FileInputFormat.addInputPath(job, new Path(otherArgs[0]));
		job.getConfiguration().set(TableOutputFormat.OUTPUT_TABLE, otherArgs[1]);

System.exit(job.waitForCompletion(true)?0:1);
	}
}

再次编译、打包，然后运行成功！

查询HBase表，验证数据是否已导入：

hbase(main):001:0> scan 'mytable'
ROW                         COLUMN+CELL                                                                 
 r1                         column=cf:c1, timestamp=1439223857492, value=value1                         
 r2                         column=cf:c2, timestamp=1439223857492, value=value2                         
 r3                         column=cf:c3, timestamp=1439223857492, value=value3                         
3 row(s) in 1.3820 seconds

可以看到，数据导入成功！

由于需要频繁的与存储数据的RegionServer通信，占用资源较大，一次性入库大量数据时，TableOutputFormat效率并不好。

二、拓展-TableReducer

我们可以将Hdfs2HBaseReducer.java代码改成下面这样，作用是一样的：

package com.lisong.hdfs2hbase;

import java.io.IOException;

import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.Writable;
import org.apache.hadoop.mapreduce.Reducer;
import org.apache.hadoop.hbase.mapreduce.TableReducer;
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
import org.apache.hadoop.hbase.client.Put;
import org.apache.hadoop.hbase.util.Bytes;

public class Hdfs2HBaseReducer extends TableReducer<Text, Text, ImmutableBytesWritable> {
	public void reduce(Text rowkey, Iterable<Text> value, Context context) throws IOException,InterruptedException {
		String k = rowkey.toString();
		for(Text val : value) {
			Put put = new Put(k.getBytes());
			String[] strs = val.toString().split(":");
			String family = strs[0];
			String qualifier = strs[1];
			String v = strs[2];
			put.add(family.getBytes(), qualifier.getBytes(), v.getBytes());
			context.write(new ImmutableBytesWritable(k.getBytes()), put);
		}
	}
}

这里直接继承了TableReducer，TableReducer是部分特例化的Reducer，它只有三个类型参数：输入Key/Value是对应Mapper的输出，输出Key可以是任意的类型，但是输出Value必须是一个Put或Delete实例。

编译打包运行，结果与前面的一样！

MapReduce将HDFS文本数据导入HBase中

MapReduce将HDFS文本数据导入HBase中

一、示例程序

二、拓展-TableReducer

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